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* +htslib.org * Needs bzip2 * bz2 and lzma as rundeps * zlib * libcurl --------- Co-authored-by: James Reynolds <magnsuviri@me.com> Co-authored-by: Jacob Heider <jacob@tea.xyz>
37 lines
680 B
YAML
37 lines
680 B
YAML
distributable:
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url: https://github.com/samtools/htslib/releases/download/{{version.raw}}/htslib-{{version.raw}}.tar.bz2
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strip-components: 1
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versions:
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github: samtools/htslib
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dependencies:
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sourceware.org/bzip2: '*'
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tukaani.org/xz: '*'
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zlib.net: ^1
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curl.se: '>=5'
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build:
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dependencies:
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tea.xyz/gx/cc: '*'
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gnu.org/make: '*'
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gnu.org/autoconf: '*'
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gnu.org/automake: ^1
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script:
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- autoreconf -i
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- ./configure $ARGS
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- make --jobs {{ hw.concurrency }} install
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env:
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ARGS:
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- --prefix="{{prefix}}"
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provides:
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- bin/bgzip
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- bin/htsfile
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- bin/tabix
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test: |
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htsfile test.sam
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bgzip -c test.sam > sam.gz
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tabix -p sam sam.gz
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